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글루코스 존재하에서 GdpS가 extracellular DNAs 조절을 통해 황색포도알균의 biofilm 형성에 영향을 끼친다

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Author(s)
권안성
Issued Date
2010
Keyword
Biofilm|extracellular DNAs|Autolysis
Abstract
The gdpS gene in Staphylococcus aureus contains GGDEF domain, which is implied in diguanyl cyclase activity. Recently, the staphylococcal gdpS gene was proposed to upregulate biofilm formation via icaADBC encoding polysaccharide intercellular adhesin in the presence of NaCl. In this study, deletion of gdpS gene in 8325-4 and seven clinical isolates of S. aureus enhanced the biofilm formation in the presence of glucose in the dose-independent manner. Neither the icaADBC operon nor sigB affected the biofilm formation by the gdpS mutant. In biofilm detachment assays, while either proteinase K or NaIO3 treatment did not affect biofilm integrity, DNase I treatment resulted in greatly reduced biofilm, suggesting that extracellular DNAs (eDNAs) is an important component of the biofilm. The importance of eDNAs in biofilm formation was confirmed by the observation that, in a real time PCR analysis, eDNA level was increased in gdpS mutants compared with that of the parental strain. Inactivation of cidA, holin-like autolysis regulator gene, reversed the biofilm formation of the gdpS mutant of 8325-4. On the contrary, the biofilm formation was still enhanced in the cidA gdpS double mutants of the clinical isolates including YL50, showing that cidA role in biofilm formation depends on the strain background. In addition, autolysis analysis displayed that the gdpS mutant of 8325-4 and the cidA gdpS double mutant of YL50 were the most susceptible to addition of Triton X-100. Interestingly, the enhanced biofilm formation of the cidA gdpS double mutant of CM75 was reversed by disrupting σB, which was not found in the other clinical strains, indicating that the effect of GdpS in 8325-4, which is devoid of σB activity, on biofilm formation via cidA was strain-dependent. Finally, disruption of the atl encoding major autolysin in the gdpS mutants of CM01 and CM09 clinical strains resulted in the lack of the biofilm formation. Collectively, in the presence of glucose, GdpS in S. aureus affects biofilm formation through regulating lysis-associated genes including atl and cidA genes.
Alternative Title
GdpS of Staphylococcus aureus affects biofilm formation in the presence of glucose through regulating extracellular DNAs
Alternative Author(s)
Kwon, An Sung
Affiliation
조선대학교 일반대학원
Department
일반대학원 바이오신약개발학과
Advisor
임용
Awarded Date
2010-08
Table Of Contents
TABLE OF CONTENTS

TABLE OF CONTENTS..............................................................................Ⅰ
LIST OF TABLES.......................................................................................Ⅲ
LIST OF FIGURES.....................................................................................Ⅳ
ABSTRACT...............................................................................................ⅤI

Ⅰ. 서론......................................................................................................1

Ⅱ. 재료 및 방법........................................................................................4
1. Strains, plasmids와 growth conditions......................................................4
2. DNA manipulations.................................................................................4
3. gdpS gene의 allele replacement...............................................................5
4. gdpS mutant의 complementation.............................................................6
5. Biofilm assay.........................................................................................6
6. Biofilm detachment assay........................................................................7
7. RNA purification과 Real-time PCR............................................................7
8. eDNAs 측정...........................................................................................8
9. Autolysis assay와 zymogram analysis.......................................................9

Ⅲ. 결과....................................................................................................11
1. Glucose 존재 하에서 gdpS mutation은 S. aureus 8325-4 strain 및 다른
clinical isolates의 biofilm 형성을 증가시킨다...........................................11
2. gdpS gene의 C-terminal domain을 encoding하는 gene의 complementation은
biofilm에 영향을 미치지 못한다..............................................................12
3. gdpS mutation은 NaCl과 glucose 존재유무에 따라 biofilm 형성에 상반된
영향을 미친다......................................................................................13
4. 0.5% 이상 Glucose 농도에서는 농도에 관계없이, glucose가 존재하는 경우
gdpS mutant는 24h 배양 후, biofilm 형성이 증가된다...............................14
5. gdpS gene은 NaCl을 넣지 않은 TSB (W/O)-0.5% glucose 배지에서 ica
operon을 통한 biofilm 형성에 관여하지 않는다........................................16
6. gdpS mutant의 biofilm 형성 증가는 eDNAs가 관여한다.............................16
7. gdpS mutation은 다양한 cell lysis-related genes의 발현에 영향을 미친다....17
8. 8325-4 strain에서 gdpS mutant는 cidA를 통해 biofilm 형성에 관여하지만,
다른 임상 strain들에서는 관여하지 않는다...............................................18
9. 8325-4 strain에서는 gdpS와 cidA double mutation으로 인하여 eDNAs
release가 감소되고, YL50 strain에서는 오히려 증가된다............................19
10. gdpS mutation은 autolysis를 증가시킨다................................................19
11. 8325-4와 YL50 strain의 murein hydrolases profiles은 다르다...................20
12. gdpS와 cidA double mutation으로 인한 biofilm 형성의 증가에 sigB가
관여한다............................................................................................21
13. YL50 strain의 gdpS와 cidA double mutant에서 atl의 expression이
증가한다............................................................................................22
14. 임상 분리주인 CM01과 CM09 strain의 gdpS mutant는 atl을 통해서 biofilm
형성에 관여한다.................................................................................22


Ⅳ. 고찰...................................................................................................24

V. 참고문헌...............................................................................................51
Degree
Doctor
Publisher
조선대학교 일반대학원
Citation
권안성. (2010). 글루코스 존재하에서 GdpS가 extracellular DNAs 조절을 통해 황색포도알균의 biofilm 형성에 영향을 끼친다.
Type
Dissertation
URI
https://oak.chosun.ac.kr/handle/2020.oak/8700
http://chosun.dcollection.net/common/orgView/200000240122
Appears in Collections:
General Graduate School > 4. Theses(Ph.D)
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