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Purification and characterization of a thermostable thrombin-like serine protease from a snake venom

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Author(s)
조으리
Issued Date
2009
Abstract
Purification and characterization of a thermostable thrombin-like serine protease from a snake venom


Jo, Eu-Ri
Advisor : Prof. Lee, Jung Sup
Department of Biotechnology
Graduate School of Chosun University


Snake venom proteases affect various physiological functions including platelet aggregation, blood coagulation, fibrinolysis, blood pressure, and nervous system. In this study, a thermostable thrombin-like serine protease (TLSP) was purified and characterized from a venom of Gloydius halys ussuriensis (Russian viper). Purification of the TLSP was performed using various chromatographic steps including anion exchange columns with Hiprep 16/10 Q FF and Source 15 Q 4.6/100 PE, a gel filtration with Superdex 75 10/300 GL in order, and then another anion exchange column with Mono QTM HR 5/5 as a final step. The purified TLSP appeared to be a single polypeptide on sodium dodecyl sulfate (SDS)-polyacrylamide gel. The amino terminal sequence of TLSP was found to be NH2-VVGGDEHNIN-COOH, showing a significant similarity ≥ 80% to those of thrombin-like serine proteases from other snake venoms. On SDS-polyacrylamide gel, the apparent molecular weights of TLSP was estimated to be 35 kDa and 26 kDa under reducing and non-reducing conditions, respectively. TLSP was stained with periodic acid-Schiff (PAS) and the size was reduced to about 33 kDa after treatment with N-glycosidase F under the reducing condition. These results suggest that TLSP is a glycosylated protease presumably having N-linked sugar chains. TLSP completely degraded the β-chain of human fibrinogen within 2 hr at 37℃, with much slower digestion of the α-chain. However, TLSP failed to induce formation of fibrin polymer through its fibrinogen cleavage. TLSP cleaved prothrombin, but the resulting products did not show any thrombin activity. In addition, TLSP did not cleave the fibrin polymer. TLSP showed an amidolytic activity against VPR-pNA (specific for thrombin), LGR-pNA (for factor Xa), and S-2288 (for t-PA and a broad serine proteases). Among these substrates, Boc-VPR-pNA was the most favorable one for TLSP. When Boc-VPR-pNA was used as a substrate, the enzyme kinetics of TLSP could be obtained as follows: KM = 0.3 mM and Kcat = 8.69 s-1. The enzyme activity of TLSP was inhibited by various serine protease inhibitors including aprotinin, PMSF, and DFP, not by metalloprotease inhibitors including EDTA, DTT and 1,10-PT. These results suggest that TLSP belongs to a member of the serine proteases. On the other hand, the enzyme activity of TLSP was inhibited by various divalent cations such as Ni2+, Zn2+, and Cu2+. The optimal pH for TLSP enzyme activity was about pH 9.0. Surprisingly, the 59% enzyme activity remained, even at 100℃. Furthermore, TLSP showed no enzyme activity when it was treated with N-glycosidase F, suggesting that a glycosylation on the enzyme may have greatly influence on enzyme activity. Taken together, the results obtained by this study suggest that TLSP is a novel glycosylated thermostable thrombin-like serine protease that cleaves the β-chain more preferentially than the α-chain of fibrinogen.
Alternative Title
뱀독으로부터 열 안정성 트롬빈-유사 단백질분해효소의 정제 및 특성분석
Alternative Author(s)
Jo Eu-Ri
Affiliation
조선대학교 일반 대학원
Department
일반대학원 자연과학
Advisor
이정섭
Awarded Date
2009-08
Table Of Contents
LIST OF TABLES iii
LIST OF FIGURES iv

ABSTRACT 1

I. INTRODUCTION 4

II. MATERIALS AND METHODS 8
II-1. Materials 8
II-2. Purification of TLSP from Gloydius halys ussuriensis
snake venom 9
II-3. SDS-PAGE analysis 10
II-4. Deglycosylation of TLSP 10
II-5. Amidolytic activity of TLSP 11
II-6. Fibrinolytic activity assay 11
II-7. Fibrinogenolytic activity assay 12
II-8. Effect of TLSP on prothrombin and plasminogen 12
II-9. Effect of protease inhibitors and divalent cations on TLSP
enzyme activity 13
II-10. Effect of temperature and pH on TLSP enzyme activity 13
II-11. N-terminal sequencing 14

III. RESULTS AND DISCUSSION 15

III-1. Purification of TLSP 15
III-2. Enzyme kinetics of TLSP 22
III-3. N-terminal amino acid sequence of TLSP 22
III-4. Enzymatic properties of TLSP 25
III-4-1. Amidolytic activity of TLSP 25
III-4-2. Proteolytic activity of TLSP 27
III-4-3. Effect of protease inhibitors and divalent cations
on TLSP enzyme activity 31
III-4-4. Effect of pH and temperature on TLSP enzyme activity 31

IV. 적 요 40

V. References 42


LIST OF TABLES

Table 1. Purification summary of TLSP 18
Table 2. Kinetic values of TLSP 23
Table 3. Comparison of N-terminal amino acid sequence of
TLSP with those of α-thrombin and other
thrombin-like serine proteases 24
Table 4. Substrate specificity of TLSP 26
Table 5. Effect of various inhibitors on TLSP enzyme activity 33
Table 6. Effect of divalent cations on TLSP enzyme activity 34


LIST OF FIGURES

Fig. 1. Blood coagulation pathways in part 5
Fig. 2. Purification steps of TLSP 16
Fig. 3. SDS-PAGE analysis of the proteins obtained from
the purification steps 17
Fig. 4. SDS-PAGE analysis of the purified TLSP 19
Fig. 5. SDS-PAGE analysis of TLSP stained with Coomassie brilliant
blue or periodic acid-Schiff 20
Fig. 6. SDS-PAGE analysis of the deglycosylated TLSP 21
Fig. 7. Degradation of fibrinogen by TLSP 28
Fig. 8. Time-dependent degradation of fibrinogen and formation
of fibrin polymer by TLSP 29
Fig. 9. Cleavage of plasminogen and prothrombin by TLSP 30
Fig. 10. Effect of TLSP on fibrin polymer and cross-linked fibrin 32
Fig. 11. Effect of pH on TLSP enzyme activity 35
Fig. 12. Effect of temperature on TLSP enzyme activity 37
Fig. 13. Effect of temperature on the fibrinogenolytic activity of TLSP 38
Fig. 14. Effect of the removal of carbohydrates on TLSP 39
Degree
Master
Publisher
조선대학교 대학원
Citation
조으리. (2009). Purification and characterization of a thermostable thrombin-like serine protease from a snake venom.
Type
Dissertation
URI
https://oak.chosun.ac.kr/handle/2020.oak/8224
http://chosun.dcollection.net/common/orgView/200000238293
Appears in Collections:
General Graduate School > 3. Theses(Master)
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